Photo by Bob Kirschke

Find hotels in Harbor Island, San Diego from $91

    Plan, book, stay with confidence
    bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    one key icon
    Treat yourself
    Save instantly and earn perks with One Key
    today icon
    Change your mind
    Book hotels with free cancellation

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveler experience
Traveler experience

Discover 7,885 Harbor Island hotels and places to stay, with room rates, reviews, and availability. Most hotels are fully refundable.

Wyndham San Diego Bayside
4.0 star property
8.2 out of 10, Very Good, 5,856 reviews
"We were supposed to go to Disney cruise, but the hotel is wonderful. We went there twice."
The price is $169
$191 total
includes taxes & fees
Jul 1 - Jul 2
Wyndham San Diego Bayside
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very Good, 1,815 reviews
"Amazing place "
The price is $314
$399 total
includes taxes & fees
Jun 23 - Jun 24
Paradise Point Resort & Spa
Wyndham Garden San Diego Near SeaWorld
3.0 star property
7.2 out of 10, Good, 2,770 reviews
"The construction open wide does not gives privacy "
The price is $119
$134 total
includes taxes & fees
Jun 17 - Jun 18
Wyndham Garden San Diego Near SeaWorld
The Dana on Mission Bay
3.5 star property
8.8 out of 10, Excellent, 2,551 reviews
"The food"
The price is $189
$213 total
includes taxes & fees
Jun 23 - Jun 24
The Dana on Mission Bay
Manchester Grand Hyatt San Diego
4.0 star property
9.0 out of 10, Wonderful, 3,144 reviews
"I like it I love this hotel "
The price is $197
$270 total
includes taxes & fees
Jul 1 - Jul 2
Manchester Grand Hyatt San Diego
Omni San Diego Hotel
4.0 star property
9.0 out of 10, Wonderful, 1,848 reviews
"Beautiful hotel."
The price is $220
$281 total
includes taxes & fees
Jul 1 - Jul 2
Omni San Diego Hotel
Sheraton San Diego Hotel and Marina
4.0 star property
7.8 out of 10, Good, 2,249 reviews
"Had a great time!! "
The price is $194
$248 total
includes taxes & fees
Jun 23 - Jun 24
Sheraton San Diego Hotel and Marina
Bay Club Hotel & Marina
3.5 star property
9.0 out of 10, Wonderful, 1,979 reviews
"I was in San Diego for a family event. I am so glad I stayed at the Bay Club. It was relaxing and I loved having the restaurant service available throughout the day. I loved my view of the bay and boats. I actually relaxed and walked to restaurants in the area in between family gatherings. "
The price is $169
$191 total
includes taxes & fees
Jul 7 - Jul 8
Bay Club Hotel & Marina
DoubleTree by Hilton San Diego - Hotel Circle
4.0 star property
7.4 out of 10, Good, 1,563 reviews
"R"
The price is $149
$168 total
includes taxes & fees
Jun 17 - Jun 18
DoubleTree by Hilton San Diego - Hotel Circle
Hard Rock Hotel San Diego
4.0 star property
8.8 out of 10, Excellent, 2,168 reviews
"Great place 10/10 recommend "
The price is $188
$255 total
includes taxes & fees
Jul 2 - Jul 3
Hard Rock Hotel San Diego
California Suites Hotel
2.0 star property
7.2 out of 10, Good, 1,375 reviews
"Very fast service and clean room! Thank u"
The price is $91
$103 total
includes taxes & fees
Jun 18 - Jun 19
California Suites Hotel
San Diego Mission Bay Resort
4.0 star property
8.2 out of 10, Very Good, 1,031 reviews
"The property is beautiful and relaxing! Great view! I was just surprised that some parts of our room was dusty. "
The price is $284
$364 total
includes taxes & fees
Jun 17 - Jun 18
San Diego Mission Bay Resort
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, 1,014 reviews
"The stay was great. Beds are a bit hard. Our room was huge. Loved the space. The plumbing kinda sucked. For a fair price I’d stay again."
The price is $134
$151 total
includes taxes & fees
Jun 19 - Jun 20
Mission Bay Inn San Diego
Hilton San Diego Bayfront
4.0 star property
8.4 out of 10, Very Good, 1,512 reviews
"Great location! Super walkable to a lot of great areas, the Gaslamp Quarter, Petco Park, Convention Center, USS Midway, etc!"
The price is $166
$234 total
includes taxes & fees
Jul 2 - Jul 3
Hilton San Diego Bayfront
Marriott Marquis San Diego Marina
4.0 star property
8.8 out of 10, Excellent, 1,802 reviews
"Great place to stay next to convention center downtown. Would stay again."
The price is $246
$313 total
includes taxes & fees
Jul 2 - Jul 3
Marriott Marquis San Diego Marina
Best Western Plus Island Palms Hotel & Marina
3.0 star property
8.8 out of 10, Excellent, 1,576 reviews
"We were there for a family vacation - this is a beautiful location - with views to die for! So many things to do within walking distance. We loved it so much! Staff was super friendly! Would definitely stay here again! 💙"
The price is $187
$211 total
includes taxes & fees
Jun 30 - Jul 1
Best Western Plus Island Palms Hotel & Marina
Legacy Resort Hotel & Spa
4.0 star property
9.0 out of 10, Wonderful, 2,923 reviews
"Quiet relaxed Getaway "
The price is $211
$238 total
includes taxes & fees
Jun 23 - Jun 24
Legacy Resort Hotel & Spa
Days Inn by Wyndham San Diego Hotel Circle
3.0 star property
7.6 out of 10, Good, 1,902 reviews
"Quiet hotel with decent rooms."
The price is $125
$141 total
includes taxes & fees
Jun 17 - Jun 18
Days Inn by Wyndham San Diego Hotel Circle
Hampton Inn San Diego-Downtown
2.5 star property
8.2 out of 10, Very Good, 1,426 reviews
"Great "
The price is $180
$203 total
includes taxes & fees
Jul 2 - Jul 3
Hampton Inn San Diego-Downtown
The Wayfarer San Diego
4.0 star property
9.2 out of 10, Wonderful, 1,091 reviews
"Great property and location. Enjoyed everything at the property. Rooms were a bit small but overall great property."
The price is $263
$297 total
includes taxes & fees
Jun 17 - Jun 18
The Wayfarer San Diego
Don't see what you're looking for?
See all available properties in Harbor Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Other neighborhoods around Harbor Island

Hotels in top San Diego neighborhoods Learn more about Harbor Island

Frequently asked questions

What's it like in Harbor Island?

Harbor Island is a scenic neighborhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.

Where is the best hotel for a stay in Harbor Island?

Based on Expedia customer reviews, Hilton San Diego Airport/Harbor Island is the highest ranked property in Harbor Island. This hotel is a short 5-minute walk from Naval Base Coronado, and it offers a restaurant and an outdoor pool.

How many hotels will I find in Harbor Island?

Book one of Expedia's 6 hotels and other accommodations in Harbor Island and start exploring everything San Diego has to offer.

If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?

Yes, the majority of hotel bookings are fully refundable if you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a reservation that's non-refundable, it may still be possible to cancel it and receive a refund within a 24-hour period of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to get the best deals in Harbor Island.

Where can I learn more about changing or cancelling my trip to Harbor Island?

For more information about rescheduling or cancelling your trip to Harbor Island, head over to our customer service page.

What is there to do around this San Diego neighborhood?

San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, be sure to visit other sights like Marine Corps Recruit Depot or USS Midway Museum.

Recent reviews of Harbor Island hotels